Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941756.1_cds_XP_016485518.1_76438
CDS Infomation

[gene=LOC107805925] [db_xref=GeneID:107805925] [protein=filament-like plant protein isoform X3] [protein_id=XP_016485518.1] [location=join(21519..21629,25019..25175,25347..26641,26756..27151)] [gbkey=CDS]
Sequence

ATGGAAAAGAGGAAATGGTTGTGGAAGAGGAAACCTTCCGATAAGAGCCCTGGTGAAACG
GAGAGTTCTGGTTCATTGTCTTCGCATTCAGAGAGATACTCTGATGAGCAGTCACCAGAG
ATAACCTCAAAAGCTGCAACTATTGATGATGAAGCCAAGGAAAGCTTGAGAAGTTTGACA
GAGAAGTTATCAGCTGCTCTTGTTAATGTTAGTGCCAAAGAAGACTTAGTTAAGCAGCAT
GCAAAAGTAGCTGAAGAAGCTATTGCGGGTTGGGAAAAGGCAGAAAGTGAAGTTGCAGTT
GTAAAGCAACAACTAGATGCAGCCGTGCAGCAGAACTTGTCTTTGGAAGTTCGTGTCAGC
CATCTTGATGGTGCACTAAAGGAATGTGTCAGGCAGTTGAGACAAGCTAGGGATGAGCAA
GAGAAACGAATTCAAGAAGCTGTTGTAGAGAAAAATGAATGGGAATCTGAAAAAGCTGCA
CTTGAAAACCAGCTACTTAAGCTCCAGTCACAAGTAGAGACTTGCAAAGCTGAAACTCCT
ACTTCTACTGATCCTGATATCCTTGTCAGGCTTGATTGTCTGGAGAAGGAGAATACAGCT
CTCAAAATTGAGCTTCACTCTTGTTCAGAGGAGTTGGAAATTAGGACCATCGAGAGGGAT
TTGAGCACTCAAGCAGCAGAATCCGCCAGCAAGCAGCACCTAGAAAGCATAAAAAAGGTG
ACCAAGCTTGAAGCTGAGTGTCGAAAGCTTCAGGCCACGGCGCGCAAAGCATCCCCATTT
AGTGATCAACGTTCCTCTGCTGTTTCATCTTACTATGTAGAGTCTGTCACTGATAGTCAG
TCTGATAGCGGAGAGCGGTTAAATACAGTCGATAACGATGGCCTTAAGATGACTAAACTG
GAAACAAATGAATATGAACCAAGTTGCTCTAATTCATGGGCTTCGGCACTCATTGCTGAG
CTTGATCAATTTAAGAATGAAAAGGCCACGCATAAAACTCTTGCTGCCTGTTCCATTGAA
ATTGATATGATGGATGACTTCTTGGAGATGGAACGACTTGCTGCATTATCTGAAACTGCT
AATAAGACACCTTCAATTACATCTGATGCTGTTCCTCATGACTCACCCAATGTCGAGAAC
CCTTTGGCAGCAGAATATGATTCCATTTCACAAAGGGTGGCTGAATTAGAACAAAAGCTG
GAGAAGATAGAAGCAGAGAAAGCTGAACTGGAGAATGCTTTAAGCGAGTGTCAAGATGCC
CTTAAGGTGTCCTCTGTGCATCTTAAGGAAAGTCAAACCAGATTGGAAGAGCTGCAGAAG
GAGCTAGATGCAGTGAATGAATCAAAAGAGTTGCTTGAGTTTCAACTCTTCGGCATGGAG
GTAGAAGCACGGACCATGTCTGCAAATATTGGTTCTTTGAAGACAGAGATTGAAAGAGAA
CAATCCTTGTCATCAGACATGGAAGCTAAGTGTCGTGAATTGGAAAATGAGCTCCAGAAA
AAAGACCAGAAAGTTGAACTTCAGCAAACTTTTGGTTCAAACGGTGAAGTGAAAATAAAA
CAGGAGGATTTAGCAGTGGCTGCTGACAAGCTTGCAGAATGCCAGAAAACAATTGCATCC
CTTGGAAAACAGCTACAGTCCCTAGCCACTCTGGAAGATTTCCTGATAGACACTGCAAAT
CTTCCTGGGGGAGAATCAGTTGTTGCTAAAGCGGGAGGAGAACTATGGAAATTGCATGTA
AACGAGACATTTACCCCAAAATGCGGTTCTGATCCTTCCAAGGTCGAGGAAGAGAATGCG
AGTCATTCTATGAATGGAAATGAAGGGGAATCATCAGCATCTTCATCTACTTCATCCGCT
ACTCAGGCGACCACTGCCAAAAGCAAAAATGGTTTTGGGAAATTGTTTTCTCGGAGTAAG
AGCGGACTCCCAACGCTAAAAGTTAATGACGATAAATAA

Peptide Sequence

PEP ID

XP_016485518.1
PEP Infomation

PREDICTED: filament-like plant protein isoform X3 [Nicotiana tabacum]
Sequence

MEKRKWLWKRKPSDKSPGETESSGSLSSHSERYSDEQSPEITSKAATIDDEAKESLRSLT
EKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAESEVAVVKQQLDAAVQQNLSLEVRVS
HLDGALKECVRQLRQARDEQEKRIQEAVVEKNEWESEKAALENQLLKLQSQVETCKAETP
TSTDPDILVRLDCLEKENTALKIELHSCSEELEIRTIERDLSTQAAESASKQHLESIKKV
TKLEAECRKLQATARKASPFSDQRSSAVSSYYVESVTDSQSDSGERLNTVDNDGLKMTKL
ETNEYEPSCSNSWASALIAELDQFKNEKATHKTLAACSIEIDMMDDFLEMERLAALSETA
NKTPSITSDAVPHDSPNVENPLAAEYDSISQRVAELEQKLEKIEAEKAELENALSECQDA
LKVSSVHLKESQTRLEELQKELDAVNESKELLEFQLFGMEVEARTMSANIGSLKTEIERE
QSLSSDMEAKCRELENELQKKDQKVELQQTFGSNGEVKIKQEDLAVAADKLAECQKTIAS
LGKQLQSLATLEDFLIDTANLPGGESVVAKAGGELWKLHVNETFTPKCGSDPSKVEEENA
SHSMNGNEGESSASSSTSSATQATTAKSKNGFGKLFSRSKSGLPTLKVNDDK

Transcript Sequence

Gene sequence data has not been registered.